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Publications for mhcarvalho
(94)
2025
Evaluating miR-34c-5p impact in naïve CD4 T cell differentiation using logical modelling
(2025)
Resende, Fábio Miguel Coelho
Pinto, Francisco Rodrigues
Carvalho, Margarida Henriques da Gama
Academic documents
2025
The dark side of the genome: Development of a computational pipeline to identify transposable elements with a functional role in genome regulation
(2025)
Parente, Miguel Casanova Vieira
Morais, Nuno Luís Barbosa
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Fire4CAST – a new integrative epidemiological forecasting model for the accurate prediction of infection risk and effective control of fire blight in Pyrus orchards
(2024)
Daniel McGuire et al., with 11 authors including:
Francisco Pinto
Margarida Gama-Carvalho
Journal articles
2024
Editorial: Non-coding RNA elements as regulators of host–pathogen interactions
(2024)
Margarida Gama-Carvalho
Nham Tran
Journal articles
2024
Use of immuno-flow cytometry and real-time PCR disclose the epidemiological behaviour of Erwinia amylovora populations during the winter in Portuguese pear orchards
(2024)
Daniel McGuire et al., with 11 authors including:
Francisco Pinto
Margarida Gama-Carvalho
Journal articles
2024
Testing miRNA-engineered exosomes as regulators of inflammation in Alzheimer’s disease research models
(2024)
Lourenço, Maria Queirós Varandas
Brites, Dora Maria Tuna de Oliveira
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Establishing a system for the selective therapeutic elimination of HIV-1 latently infected cells through a Tat dependent gene expression kill-switch
(2024)
Moraes, Filipa Lamy Pimenta Trigo de
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Modulation of Aquaporins by miRNAs and its Therapeutic Potential to Reduce Inflammation
(2024)
Nunes, Carlos Jorge Pinto
Silva, Inês Margarida Vieira da
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Boosting anti-tumor immune responses by rendering tumor-specific T cells resistant to immunosuppression
(2024)
Oliveira, Matilde Maria Sá Alves Carviçais de
Almeida, Luís
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Role of Short-Chain Fatty Acids and Ffar2 in Dendritic Cell Metabolism and Function
(2024)
Madeira, Bárbara Gonçalves Alves dos Santos
Carvalho, Margarida Henriques da Gama
Berod, Luciana
Academic documents
2024
Development of an HIV-1 Rev-dependent post-transcriptional regulatory system as a tool for selective therapeutic elimination of latently infected cells
(2024)
Fernandes, Carolina Ferreira
Carvalho, Margarida Gama
Academic documents
2024
Role for histone eviction in macrophage activation
(2024)
Casanova, Filipe Duarte Diogo
Costa, Ana Roxo Leão Neves
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Trypanosoma brucei-derived factor(s) regulate lipolysis in adipocytes
(2024)
Ferreira, David Filipe Valente
Figueiredo, Luísa Miranda
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Functional analysis of epigenetic differentially methylated regions in the context of rare diseases
(2024)
Macedo, Catarina Zorro Nobre Mesquita
Defrance, Matthieu
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Unravelling the role of peripheral innervation in the intestine : an in vitro approach
(2024)
Coimbra, Tomás Santos
Wieringa, Paul
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Strategies of miR-124-3p Enrichment in Neuronal Exosomes and Reparative Effects in Human Tricultures Modeling Aging, Neurodegeneration, and Inflammation in Alzheimer’s Disease
(2024)
Évora, Artemizia Tatiana Santos
Brites, Dora Maria Tuna de Oliveira
Carvalho, Margarida Henriques da Gama
Academic documents
2024
Exploring 3’ UTR Isoforms : decrypting miR-34c-5p’s gene regulation
(2024)
Araújo, Tomás Viana Pereira de Faria
Carvalho, Margarida Henriques da Gama
Academic documents
2023
A catalogue of the prophages of the genus Helicobacter
(2023)
Proença, Marta Sousa
Vale, Ana Filipa Ferreira do
Carvalho, Margarida Henriques da Gama
Academic documents
2023
Analysis of asymptomatic Drosophila models for ALS and SMA reveals convergent impact on functional protein complexes linked to neuro-muscular degeneration
(2023)
Marina L. Garcia-Vaquero et al., with 11 authors including:
Marcelo Pereira
Tânia M. Marques
Francisco R. Pinto
Margarida Gama-Carvalho
Journal articles
2023
Circulating Tumour Cell Associated MicroRNA Profiles Change during Chemoradiation and Are Predictive of Response in Locally Advanced Rectal Cancer
(2023)
Stephanie H. Lim et al., with 12 authors including:
Margarida Gama-Carvalho
Journal articles
2023
Small non-coding RNAs encoded by RNA viruses: old controversies and new lessons from the COVID-19 pandemic
(2023)
Carolina Ruivinho
Margarida Gama-Carvalho
Journal articles
2023
DIS3L2 knockdown impairs key oncogenic properties of colorectal cancer cells via the mTOR signaling pathway
(2023)
Juan F. García-Moreno et al., with 7 authors including:
Margarida Gama-Carvalho
Journal articles
2023
A New Perspective for Vineyard Terroir Identity: Looking for Microbial Indicator Species by Long Read Nanopore Sequencing
(2023)
Ana Cruz-Silva et al., with 12 authors including:
Ricardo Dias
Cristina Cruz
Margarida Gama-Carvalho
Bernardo Duarte
Andreia Figueiredo
Journal articles
2023
Mutation-class dependent signatures outweigh disease-associated processes in cystic fibrosis cells
(2023)
Lúcia Santos et al., with 8 authors including:
Margarida D. Amaral
Margarida Gama-Carvalho
Carlos M. Farinha
Journal articles
2023
Human Satellite 1A analysis provides evidence of pericentromeric transcription
(2023)
Mariana Lopes et al., with 7 authors including:
Margarida Gama-Carvalho
Journal articles
2023
Search for novel modulators of NIS abundance and retention at the plasma membrane to enhance iodide uptake
(2023)
Vareda, José António Gonçalves
Silva, Ana Luísa
Carvalho, Margarida Henriques da Gama
Academic documents
2023
Exploring nanopore long reads and whole-genome sequencing data to characterize long tandem repeats and chromosome structure in mammalian genomes
(2023)
Eleutério, Daniel Alexandre Varela Marques
Carvalho, Margarida Henriques da Gama
Dias, Ricardo
Academic documents
2023
Characterization of a novel whole-sporozoite vaccine against malaria
(2023)
Carvalho, Madalena Soares Ferreira de Jesus
Prudêncio, Jorge Miguel Martins
Carvalho, Margarida Henriques da Gama
Academic documents
2023
Understanding the influence of the central brain on coordinated walking using Drosophila melanogaster
(2023)
Andrade, Vasco Maria Horta e Costa Freire de
Mendes, César S.
Carvalho, Margarida Henriques da Gama
Academic documents
2022
Network Approaches to Study Endogenous RNA Competition and Its Impact on Tissue-Specific microRNA Functions
(2022)
Tânia Monteiro Marques
Margarida Gama-Carvalho
Journal articles
2022
Unveiling the regulation of germinal centre responses and antibody production by follicular T cells
(2022)
Saumya Dileep Kumar
Luís Ricardo Simões da Silva Graça
Margarida Henriques da Gama Carvalho
Academic documents
2022
Therapeutic Metabolic Reprograming Using microRNAs: From Cancer to HIV Infection
(2022)
Mark S. Gibson
Cláudia Noronha-Estima
Margarida Gama-Carvalho
Journal articles
2022
Evaluating the impact of 2D, 3D static and 3D microfluidic tissue culture conditions on the in vitro response of cancer cells to chemotherapeutic agents
(2022)
Almeida, Mariana Gaspar de
Carvalho, Margarida Henriques da Gama
Academic documents
2022
Virulence-related metabolism is activated in
Botrytis cinerea
mostly in the interaction with tolerant green grapes that remain largely unaffected in contrast with susceptible green grapes
(2022)
Flávio Soares et al., with 10 authors including:
Margarida Gama-Carvalho
Ana Margarida Fortes
Journal articles
2022
Liver derived Extracellular Vesicles as Insulin Bait
(2022)
Ribeiro, Pedro Videira
Oliveira, Rita Machado de
Carvalho, Margarida Henriques da Gama
Academic documents
2022
Functional characterization of putative miRNAlike sequences encoded in the HIV genome
(2022)
Ruivinho, Carolina dos Santos
Carvalho, Margarida Henriques da Gama
Academic documents
2022
A systems approach to the mechanisms of neurodegeneration
(2022)
García-Vaquero, Marina Luque
Carvalho, Margarida Henriques da Gama
Rivas, Javier De Las
Academic documents
2022
Assessment of protein aggregation using super-resolution microscopy
(2022)
Rodrigues, Beatriz Isabel Almeida
Outeiro, Tiago Fleming
Carvalho, Margarida Henriques da Gama
Academic documents
2022
miRNA Modulation in ALS Spinal Microglia
(2022)
Matos, Ana Teresa Mateus Aspra de
Brites, Dora
Carvalho, Margarida Henriques da Gama
Academic documents
2022
Biological interacting units identified in human protein networks reveal tissue-functional diversification and its impact on disease
(2022)
Marina L. García-Vaquero
Margarida Gama-Carvalho
Francisco R. Pinto
Javier De Las Rivas
Journal articles
2022
Identification of novel biomarkers and candidate genes associated to lipid traits : improving the lipid metabolism knowledge base
(2022)
Correia, Marta Sofia da Silva
Carvalho, Margarida Gama
Bourbon, Mafalda
Academic documents
2021
Investigating Cellular and Molecular Neuroendocrine Signalling in the Diabetic Gut
(2021)
Miguel Ângelo de Freitas Mira
Inês Maria de Stoop Camões Teixeira Guerra Mollet
Margarida Gama-Carvalho
Academic documents
2021
Developmental bifurcation of human T follicular regulatory cells
(2021)
Saumya Kumar et al., with 14 authors including:
Margarida Gama-Carvalho
Journal articles
2021
Genomic Tackling of Human Satellite DNA: Breaking Barriers through Time
(2021)
Mariana Lopes
Sandra Louzada
Margarida Gama-Carvalho
Raquel Chaves
Journal articles
2021
Fasciola hepatica hijacks host macrophage miRNA machinery to modulate early innate immune responses
(2021)
Nham Tran et al., with 9 authors including:
Margarida Gama-Carvalho
Journal articles
2021
Machine learning modelling of blood lipid biomarkers in familial hypercholesterolaemia versus polygenic/environmental dyslipidaemia
(2021)
Marta Correia
Eva Kagenaar
Daniël Bernardus van Schalkwijk
Mafalda Bourbon
Margarida Gama-Carvalho
Journal articles
2021
IsomiR_Window: a system for analyzing small-RNA-seq data in an integrative and user-friendly manner
(2021)
Ana M. Vasconcelos et al., with 7 authors including:
Maria Beatriz Carmo
Margarida Gama-Carvalho
António Ferreira
Journal articles
2021
Characterisation of miR-34c-5p’s role in human and mouse T cell function
(2021)
Margarida Paulo Pedro
Margarida Gama-Carvalho
Academic documents
2021
Using iPSCs-derived microglia from Alzheimer´s disease patients to assess early cell deficits and neurotoxic properties
(2021)
Daniela Sofia Barbosa Lopes
Margarida Gama Carvalho
Dora Mª Brites
Academic documents
2020
Experimental supporting data on DIS3L2 over nonsense-mediated mRNA decay targets in human cells
(2020)
Paulo J. da Costa et al., with 9 authors including:
Margarida Gama-Carvalho
Luísa Romão
Journal articles
2020
Decoding the Role of Satellite DNA in Genome Architecture and Plasticity—An Evolutionary and Clinical Affair
(2020)
Sandra Louzada et al., with 7 authors including:
Margarida Gama-Carvalho
Journal articles
2020
ACTN3 and Vitamin D receptor polymorphisms impact in muscle physical properties of Spondyloarthritis patients
(2020)
Pimenta, Isabel Alexandra Vitorino Tendeiro Pedroso
Santos, Fernando Pimentel
Carvalho, Margarida Gama
Academic documents
2020
Developing a virus-microRNA interactome using cytoscape
(2020)
Meredith Hill
Dayna Mason
Tânia Monteiro Marques
Margarida Gama Carvalho
Nham Tran
Journal articles
2020
Longitudinal analysis of adipocytes and liver gene expression during T. brucei infection
(2020)
João Francisco Parraga Ribeiro Colaço
Luísa Miranda Figueiredo
Margarida Henriques da Gama Carvalho
Academic documents
2020
RNA-seq analysis to unravel the molecular players involved in implantation/rejection of human tumor cells in zebrafish
(2020)
Micaela Oliveira Domingues
Rita Fior
Margarida Gama Carvalho
Academic documents
2020
Regulation of meningeal IL-17+ immune cell homeostasis: (patho)physiological implications
(2020)
Pereira, Sara Alexandra da Costa
Ribot, Julie
Carvalho, Margarida Henriques da Gama
Academic documents
2019
Monozygotic Twins Concordant for Common Variable Immunodeficiency: Strikingly Similar Clinical and Immune Profile Associated With a Polygenic Burden
(2019)
Susana L. Silva et al., with 15 authors including:
Marcelo L. M. Pereira
Margarida Gama-Carvalho
Journal articles
2019
A role for DIS3L2 over natural nonsense-mediated mRNA decay targets in human cells
(2019)
Paulo J. da Costa et al., with 9 authors including:
Margarida Gama-Carvalho
Luísa Romão
Journal articles
2019
A role for DIS3L2 over human nonsense-mediated mRNA decay targets
(2019)
Paulo J. da Costa et al., with 9 authors including:
Margarida Gama-Carvalho
Other
2019
Skeletal muscle miR-34a/SIRT1:AMPK axis is activated in experimental and human non-alcoholic steatohepatitis
(2019)
André L. Simão et al., with 8 authors including:
Margarida Gama-Carvalho
Journal articles
2019
PS-003-Activation of the miR-34a/SIRT1: AMPK axis contributes for insulin resistance and mitochondrial dysfunction in the NAFLD muscle
(2019)
AL Simão et al., with 8 authors including:
M Gama-Carvalho
Conference papers
2019
Cross Disease Network Analysis
(2019)
Ines F. Ramos
Marina L. Garcia-Vaquero
Margarida Gama-Carvalho
Francisco R. Pinto
Conference papers
2019
Combining genome-wide association analyses and gene interaction networks to reveal new genes associated with carcass traits, meat quality and fatty acid profiles in pigs
(2019)
Andreia J. Amaral et al., with 9 authors including:
Margarida Gama-Carvalho
Journal articles
2019
Characterization of sncRNAs in response to HIV
(2019)
Miguel Tavares Paiva Santos Pereira
Carvalho, Margarida Gama
Academic documents
2019
Single-molecule imaging of transcription dynamics
(2019)
Alda Filipa Queirós Oliveira e Silva
Martin, Robert Manfred
Carvalho, Margarida Henriques da Gama
Academic documents
2019
Networks of mRNA Processing and Alternative Splicing Regulation in Health and Disease
(2019)
Peter Jordan et al., with 6 authors including:
Margarida Gama-Carvalho
Book chapters
2018
Development of a new pharmacogenomics system for lung cancer based in next generation sequencing
(2018)
Lúcia de Mendonça Heitor
Margarida Henriques da Gama Carvalho
Academic documents
2018
The human mRNA decay machinery : an unexpected role for DIS3L2 over nonsense-mediated decay targets
(2018)
Paulo Jorge Gomes Pereira da Costa
Luísa Maria Ferreira Romão
Margarida Gama Carvalho
Academic documents
2018
Influence of histone octamer core distortion on nucleosome thermal mobility
(2018)
Alexandre Dias Cirilo
Silvija Bilokapic-Halic
Margarida Gama-Carvalho
Academic documents
2018
Fine-tuning of fgf8a expression through alternative polyadenylation has a selective impact on Fgf-associated developmental processes
(2018)
Sara F. Fernandes
Rita Fior
Francisco Pinto
Margarida Gama-Carvalho
Leonor Saúde
Journal articles
2018
Searching the overlap between network modules with specific betweeness (S2B) and its application to cross-disease analysis
(2018)
Marina L. Garcia-Vaquero
Margarida Gama-Carvalho
Javier De Las Rivas
Francisco R. Pinto
Journal articles
2018
Human papillomavirus 16 E6 modulates the expression of miR-496 in oropharyngeal cancer
(2018)
Dayna Mason et al., with 10 authors including:
Margarida Gama-Carvalho
Journal articles
2018
Role of mitofusin-2 in NAFLD and targeting by miRNAs
(2018)
A. Simão et al., with 8 authors including:
M. Gama-Carvalho
Journal articles
2017
Stimulation of RAC1/PAK1 signalling upregulates DNA damage repair genes via the BCL6/STAT5-switch
(2017)
P. Barros et al., with 9 authors including:
M. Gama-Carvalho
P. Matos
Conference papers
2017
Linking amyotrophic lateral sclerosis and spinal muscular atrophy through RNA-transcriptome homeostasis: a genomics perspective
(2017)
Margarida Gama-Carvalho et al., with 8 authors including:
Margarida Gama-Carvalho
Francisco R. Pinto
Journal articles
2017
miRNA profiling of human naive CD4 T cells links miR?34c?5p to cell activation and HIV replication
(2017)
Andreia J Amaral et al., with 15 authors including:
Margarida Gama-Carvalho
Journal articles
2017
Activation of miR-34a contributes to liver and muscle insulin resistance in experimental and human non-alcoholic fatty liver disease
(2017)
A.L. Simão et al., with 8 authors including:
M. Gama-Carvalho
Conference papers
2017
How Can Photo Sharing Inspire Sharing Genomes?
(2017)
Vinicius V. Cogo et al., with 6 authors including:
Vinicius V. Cogo
Alysson Bessani
Francisco M. Couto
Margarida Gama-Carvalho
Conference papers
2016
Exploring the interactions between neuron degeneration and RNA homeostasis through biological network analysis
(2016)
García-Vaquero, Marina Luque
Pinto, Francisco Rodrigues
Carvalho, Margarida Henriques da Gama
Academic documents
2016
Large-Scale Transcriptomic Approaches for Characterization of Post-Transcriptional Control of Gene Expression
(2016)
Laura Do Souto
Alfonso González-Briones
Andreia J. Amaral
Margarida Gama-Carvalho
Juan F. De Paz
Book chapters
2015
P0944 - Modulation of muscle microRNA expression profiles in patients with NAFLD and in C2C12 cells incubated with palmitic acid
(2015)
Simão AL et al., with 7 authors including:
Gama-Carvalho M
Conference papers
2015
Impact of small RNA molecules derived from the 5'ends of tRNAs in cell function
(2015)
Ramos CG
Andrade J
Gama-Carvalho M
Conference papers
2014
Phosphorylation of SRSF1 by SRPK1 regulates alternative splicing of tumor-related Rac1b in colorectal cells
(2014)
V. Goncalves et al., with 9 authors including:
M. Gama-Carvalho
P. Matos
Journal articles
2014
Regulation of Cardiac Cell Fate by microRNAs: Implications for Heart Regeneration
(2014)
Gama-Carvalho M
Andrade J and Brás-Rosário L
Journal articles
2014
Quality assessment and control of tissue specific RNA-seq libraries of Drosophila transgenic RNAi models
(2014)
Amaral AJ et al., with 7 authors including:
Gama-Carvalho M
Journal articles
2013
Expression profile of microRNAs regulating proliferation and differentiation in mouse adult cardiac stem cells
(2013)
Luis Brás-Rosário et al., with 7 authors including:
Margarida Gama-Carvalho
Journal articles
2013
Anthracyclines induce DNA damage response-mediated protection against severo sepsis
(2013)
Figueiredo N et al., with 28 authors including:
Gama-Carvalho M
Journal articles
2012
Production and characterization of different types of malaria pigment (hemozoin) and their potential use for screening for hemozoin inhibiting drugs
(2012)
Góis, Ana Margarida Ferreira
Hänscheid, Thomas
Carvalho, Margarida Henriques da Gama
Academic documents
2011
microRNA profiling of mouse adult cardiac stem cells reveals key gene expression pathways for proliferation control and cardiovascular differentiation
(2011)
Brás-Rosário L et al., with 6 authors including:
Gama-Carvalho M
Conference papers
2010
Pre-processing Optimization of RNA Immunoprecipitation Microarray Data.
(2010)
Barreto-Hernandez,E.
Gama-Carvalho,M.
Sousa,L.
Journal articles
2010
Characterization of post-trancriptional control mechanisms regulating SMN2 gene expression
(2010)
Gomes, Ana Luísa Rodrigues
Carvalho, Margarida Henriques da Gama
Telhada, Maria Margarida Blasques
Academic documents
2010
Caracterização bioquímica e funcional de complexos proteicos associados ao 3’UTR de mRNAs alvo
(2010)
Oliveira, Mariana Colino de
Carvalho, Margarida Henriques da Gama
Farinha, Carlos
Academic documents
2010
MicroRNA and gene expression profiling of adult cardiac stem cells
(2010)
Pinheiro, Ana Isabel Ribeiro de Melo
Carvalho, Margarida Henriques da Gama
Malhó, Rui
Academic documents
2008
Análise por microarrays de complexos ribonucleoproteicos: normalização e selecção de genes com associação diferencial
(2008)
Carina Silva-Fortes
Emiliano Barreto-Hernandez
Lisete Sousa
Maria Antónia Amaral Turkman
Margarida Gama-Carvalho
Conference papers